Gene detail

Detailed information of HSymV2.0_g02.03601_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:24192081...24193443
NR annotation: XP_002160865.1, ribosome biogenesis protein wdr12 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A7RHG8	Ribosome biogenesis protein WDR12 homolog (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g82024 PE=3 SV=1
Q0VC24	Ribosome biogenesis protein WDR12 OS=Bos taurus OX=9913 GN=WDR12 PE=2 SV=1
Q9GZL7	Ribosome biogenesis protein WDR12 OS=Homo sapiens OX=9606 GN=WDR12 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08154	NLE	NLE (NUC135) domain	Domain	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR028599	Family	WD repeat WDR12/Ytm1	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR012972	Domain	NLE	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19855	WD40 REPEAT PROTEIN 12, 37	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0042254	Biological Process	ribosome biogenesis	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14863	WDR12, YTM1; ribosome biogenesis protein	-	Ribosome biogenesis	ko03009	deepkoala