Gene detail

Detailed information of HSymV2.0_g02.03679_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:25186726...25193221
NR annotation: XP_052378528.1, matrix-remodeling-associated protein 5-like [Oncorhynchus keta]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q62813	Limbic system-associated membrane protein OS=Rattus norvegicus OX=10116 GN=Lsamp PE=1 SV=1
Q13449	Limbic system-associated membrane protein OS=Homo sapiens OX=9606 GN=LSAMP PE=1 SV=2
Q8BLK3	Limbic system-associated membrane protein OS=Mus musculus OX=10090 GN=Lsamp PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043005	Cellular Component	neuron projection	Interproscan