Detailed information of HSymV2.0_g02.03868_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:27651113...27667460
NR annotation: XP_047145987.1, DNA polymerase delta catalytic subunit [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P54358DNA polymerase delta catalytic subunit OS=Drosophila melanogaster OX=7227 GN=PolD1 PE=1 SV=2
P97283DNA polymerase delta catalytic subunit OS=Mesocricetus auratus OX=10036 GN=POLD1 PE=2 SV=1
P28340DNA polymerase delta catalytic subunit OS=Homo sapiens OX=9606 GN=POLD1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14260zf-C4polC4-type zinc-finger of DNA polymerase deltaDomainInterproscan
PF00136DNA_pol_BDNA polymerase family BFamilyInterproscan
PF03104DNA_pol_B_exo1DNA polymerase family B, exonuclease domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025687DomainC4-type zinc-finger of DNA polymerase deltaInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR017964Conserved_siteDNA-directed DNA polymerase, family B, conserved siteInterproscan
IPR042087Homologous_superfamilyDNA polymerase family B, thumb domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050240FamilyDNA polymerase type-BInterproscan
IPR006172FamilyDNA-directed DNA polymerase, family BInterproscan
IPR006134DomainDNA-directed DNA polymerase, family B, multifunctional domainInterproscan
IPR006133DomainDNA-directed DNA polymerase, family B, exonuclease domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10322DNA POLYMERASE CATALYTIC SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006287Biological Processbase-excision repair, gap-fillingInterproscan
GO:0006297Biological Processnucleotide-excision repair, DNA gap fillingInterproscan
GO:0008296Molecular Function3'-5'-DNA exonuclease activityInterproscan
GO:0043625Cellular Componentdelta DNA polymerase complexInterproscan
GO:0045004Biological ProcessDNA replication proofreadingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02327POLD1; DNA polymerase delta subunit 1EC:2.7.7.7
DNA repair and recombination proteinsko03400deepkoala

TOP