Detailed information of HSymV2.0_g02.04030_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:29533670...29548445
NR annotation: XP_047139499.1, tonsoku-like protein [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D4A615Tonsoku-like protein OS=Rattus norvegicus OX=10116 GN=Tonsl PE=3 SV=1
Q6NZL6Tonsoku-like protein OS=Mus musculus OX=10090 GN=Tonsl PE=1 SV=2
A9JR78Tonsoku-like protein OS=Danio rerio OX=7955 GN=tonsl PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13857Ank_5Ankyrin repeats (many copies)RepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR052311FamilyMMS22L-TONSL complex componentInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46358TONSOKU-LIKE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0031297Biological Processreplication fork processingInterproscan
GO:0043596Cellular Componentnuclear replication forkInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09257NFKBIL2; NF-kappa-B inhibitor-like protein 2-DNA repair and recombination proteinsko03400deepkoala

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