Gene detail

Detailed information of HSymV2.0_g02.04036_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:29597026...29606255
NR annotation: XP_047123158.1, ribosome biogenesis protein BRX1 homolog isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q3SZZ0	Ribosome biogenesis protein BRX1 homolog OS=Bos taurus OX=9913 GN=BRIX1 PE=2 SV=1
Q8TDN6	Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens OX=9606 GN=BRIX1 PE=1 SV=2
Q4QQT6	Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus OX=10116 GN=Brix1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04427	Brix	Brix domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026532	Family	Ribosome biogenesis protein BRX1	Interproscan
IPR007109	Domain	Brix domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13634	RIBOSOME BIOGENESIS PROTEIN BRIX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000027	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0006364	Biological Process	rRNA processing	Interproscan
GO:0019843	Molecular Function	rRNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14820	BRX1, BRIX1; ribosome biogenesis protein BRX1	-	Ribosome biogenesis	ko03009	deepkoala