Gene detail

Detailed information of HSymV2.0_g02.04111_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:30429064...30435673
NR annotation: XP_035682150.1, uncharacterized protein LOC118419725 isoform X2 [Branchiostoma floridae]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
C0HK23	L-rhamnose-binding lectin SML OS=Scomberomorus niphonius OX=321164 PE=1 SV=1
P86178	L-rhamnose-binding lectin CSL2 OS=Oncorhynchus keta OX=8018 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05270	AbfB	Alpha-L-arabinofuranosidase B (ABFB) domain	Domain	Interproscan
PF02140	Gal_Lectin	Galactose binding lectin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007934	Domain	Alpha-L-arabinofuranosidase B, arabinose-binding domain	Interproscan
IPR000922	Domain	D-galactoside/L-rhamnose binding SUEL lectin domain	Interproscan
IPR036195	Homologous_superfamily	Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily	Interproscan
IPR043159	Homologous_superfamily	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46780	PROTEIN EVA-1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046373	Biological Process	L-arabinose metabolic process	Interproscan
GO:0046556	Molecular Function	alpha-L-arabinofuranosidase activity	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan