Gene detail

Detailed information of HSymV2.0_g02.04289_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:33227555...33232284
NR annotation: XP_047122834.1, asparagine synthetase domain-containing protein 1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HSymV2.0_g02.04289_t1

TGATTTTAGTTAAAAAAGTAGTAATATAAAAGATTGTGTCCTGATGCGAAAAGATGTGTGGAATACTTTTCATTTTGTCGTCAAATGAGAAAAAAATTCAGACATTATCCGAGCTTGTGGTACCACAAATAGAAAACCGTGGACCAGATGCATCACATCAATATGCTCTTGAACTTAATGAGGTTACAACAATGGTATGTTACGGAACTGTTTTACAGTTACGAGGTGAACTAATGAAACAACCAGTTGTTGATGAGCATGGAAATTTTTTGCTGTGGAATGGTGAGATATTTGGTGGTCTTCAGATTATGGAAGATCAAAATGATACCATTGCTGTCATGGAAAAACTAAACAAATTAACAAGTCATGCTGAATTTGTCGATTTTTTCACAAGCATTCATGGTCCATGGTCATTTGTATATTTTGACGCAAAAAACAAAGAATTGTGGTATGGTCGTGATTTTCTTGGCAGGAGAAGTCTTATATCTTTCTGTGGTGACGACATGTTCTCTTTATCTTCCACTTTTCACAGAGGATTACATGCAGATTGCAAAGAAGTTCCTGCTAAAAAACTCTACTGTTTAAGTTTAAAAGACTGTCAATTTAATAACATGGGAGAGCATATACGTGAATACGCTTTCAAACCTGCATTTATCAATAAACAAATTGCAAGACATGATCACAGATGTTTAACATCAGTTTCAGCAGGAGACAAAGAAGACGACTATGTGACAGACACTCATTGTACATCGTGTGGATGCATCAGTACTGCAGGATATTATAGGGATAGTGCAAACAGTAAAGTGGGATATTACAGAGATAGTGACCTCTATGCTATTCGAGATAACATAGACCAAACTCAGTTATGTTGTAATTGTTTACACTTTTCATCCTCAGAAGAAAACAAAAAACCTTTAAGTGAAGCAAAGCTAATAGAAGGTGGTACCGAAGAAAGAACAACACTTGTTGAAGTTATAAATGAGTTTATTGCAGTTTTAGAAGAATCTGTACGAACTCGTGTTTTTAATCTTCCAAGATCTTCGGAGGATACTAATCCCAATGTAGGCGTGTTGTTTTCAGGTGGTATAGATTCAGTGATACTTGCTGCTCTCGCCCACAGATGTGTACCAAAACAAGAAGCGATCGATTTGATCAACGTTGCTTTTCAACAAAAAAACAAAATACAACAAAACGTTAAGAAAAAATATCAAAAAAAAGCGCTTGTGGAGGAGAGTGATAATTTCGATGTCCCTGATCGTATTACGGGAAGGAGAGCTCTACTTGAACTTCCTAGAGATAGATGCTGGAATTTTATCGAGGTTAATGTGACCAAGGAAGAGCTCCAGAACGAGAGGGAACAAAGTATATCAAATTTGGTTTATCCCCTGGAGTCTGTACTCGACGATAGTATCGGTTGTGCAATTTGGTTTGCAGCGCGGGGAATTGGTAATCGATTTGAAATTTCTGCATCTGGAGACCTAAAGTTAGTCGAAGAAAATTACAAAACTCCGGTTAAGGTGTTATTGACTGGCATGGGAGCGGATGAACAGCTTGGTGGATATGCAAGACATCGTACTAAATACGAAAATAACGGATGGATAGGTTTAAGAGACGAAATAAAGATGGAGTTGGAAAGAATATCATCAAGGAATTTAGGTAGAGACGACAGGTGTATATCAGACCATGGGCGTGAAGCAAGATTTCCCTTCTTAGATGAACACGTCGTTTCGTTTCTACAATCACTACCAGTTTGTATAAAGTGTGATCCGCGTCTTCCACGTGGTGAAGGAGAAAAGATCTTACTTCGAGAAGCTGCTTCATTACTTGATCTACCGTACGCAAGTAAGTTACCAAAGAGAGCTATACAATTTGGTTCAAGAATTGCTAAGTTGGAAGGTAGTAAAGAGAAGGGAAATGATAGTTGTGAAAGATTGAAACCTGCTCCTACTTTGTAAACTCTTAATGCAAAAAATAAATAAAATTCTACT

Protein

Uniprot

Uniprot term	Description
Q8BFS9	Asparagine synthetase domain-containing protein 1 OS=Mus musculus OX=10090 GN=Asnsd1 PE=2 SV=1
Q0V8E4	Asparagine synthetase domain-containing protein 1 OS=Bos taurus OX=9913 GN=ASNSD1 PE=2 SV=1
Q5ZJN0	Asparagine synthetase domain-containing protein 1 OS=Gallus gallus OX=9031 GN=ASNSD1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00733	Asn_synthase	Asparagine synthase	Domain	Interproscan
PF13537	GATase_7	Glutamine amidotransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR029055	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan
IPR001962	Domain	Asparagine synthase	Interproscan
IPR017932	Domain	Glutamine amidotransferase type 2 domain	Interproscan
IPR051857	Family	Asparagine synthetase domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45937	ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004066	Molecular Function	asparagine synthase (glutamine-hydrolyzing) activity	Interproscan
GO:0006529	Biological Process	asparagine biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01953	asnB, ASNS; asparagine synthase (glutamine-hydrolysing)	EC:6.3.5.4	Peptidases and inhibitors	ko01002	deepkoala