Detailed information of HSymV2.0_g03.05756_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_3:27398809...27478414
NR annotation: XP_047130953.1, laminin subunit alpha-3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q00174Laminin subunit alpha OS=Drosophila melanogaster OX=7227 GN=LanA PE=1 SV=2
Q61789Laminin subunit alpha-3 OS=Mus musculus OX=10090 GN=Lama3 PE=1 SV=4
Q61001Laminin subunit alpha-5 OS=Mus musculus OX=10090 GN=Lama5 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan
PF06009Laminin_IILaminin Domain IICoiled-coilInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR000034DomainLaminin IVInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR010307DomainLaminin domain IIInterproscan
IPR001368DomainTNFR/NGFR cysteine-rich regionInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007155Biological Processcell adhesionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06240LAMA3_5; laminin, alpha 3/5-Toxoplasmosisko05145deepkoala

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