Detailed information of HSymV2.0_g03.05822_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_3:28193652...28245027
NR annotation: XP_047130159.1, E3 ubiquitin-protein ligase TRIP12 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B4F6W9E3 ubiquitin-protein ligase TRIP12 OS=Xenopus tropicalis OX=8364 GN=trip12 PE=2 SV=1
F1LP64E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1
G5E870E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00014Kunitz_BPTIKunitz/Bovine pancreatic trypsin inhibitor domainDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00093VWCvon Willebrand factor type C domainDomainInterproscan
PF02825WWEWWE domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004170DomainWWE domainInterproscan
IPR001007DomainVWFC domainInterproscan
IPR002223DomainPancreatic trypsin inhibitor Kunitz domainInterproscan
IPR000569DomainHECT domainInterproscan
IPR002350DomainKazal domainInterproscan
IPR000867DomainInsulin-like growth factor-binding protein, IGFBPInterproscan
IPR018123DomainWWE domain, subgroupInterproscan
IPR037197Homologous_superfamilyWWE domain superfamilyInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR036880Homologous_superfamilyPancreatic trypsin inhibitor Kunitz domain superfamilyInterproscan
IPR020901Conserved_siteProteinase inhibitor I2, Kunitz, conserved siteInterproscan
IPR045322FamilyE3 ubiquitin-protein ligase HECTD1/TRIP12-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45670E3 UBIQUITIN-PROTEIN LIGASE TRIP12Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004867Molecular Functionserine-type endopeptidase inhibitor activityInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016607Cellular Componentnuclear speckInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

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