Gene detail

Detailed information of HSymV2.0_g03.05863_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_3:28844346...28850250
NR annotation: XP_004206050.2, sequestosome-1 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5ZIJ9	E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus OX=9031 GN=MIB2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00569	ZZ	Zinc finger, ZZ type	Domain	Interproscan
PF00564	PB1	PB1 domain	Domain	Interproscan
PF16577	UBA_5	UBA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043145	Homologous_superfamily	Zinc finger, ZZ-type superfamily	Interproscan
IPR033741	Domain	Sequestosome-1, UBA domain	Interproscan
IPR000270	Domain	PB1 domain	Interproscan
IPR000433	Domain	Zinc finger, ZZ-type	Interproscan
IPR052260	Family	Autophagy Receptor and Signaling Regulator	Interproscan
IPR009060	Homologous_superfamily	UBA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15090	SEQUESTOSOME 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0000423	Biological Process	mitophagy	Interproscan
GO:0005080	Molecular Function	protein kinase C binding	Interproscan
GO:0007032	Biological Process	endosome organization	Interproscan
GO:0016235	Cellular Component	aggresome	Interproscan
GO:0035973	Biological Process	aggrephagy	Interproscan
GO:0044753	Cellular Component	amphisome	Interproscan
GO:0070530	Molecular Function	K63-linked polyubiquitin modification-dependent protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14381	SQSTM1; sequestosome 1	-	Exosome	ko04147	deepkoala