Detailed information of HSymV2.0_g04.06023_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_4:20899...45691
NR annotation: XP_047139328.1, prelamin-A/C-like isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P11048Lamin-A OS=Xenopus laevis OX=8355 GN=lmna PE=2 SV=1
Q3ZD69Prelamin-A/C OS=Sus scrofa OX=9823 GN=LMNA PE=3 SV=1
P48678Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00038FilamentIntermediate filament proteinCoiled-coilInterproscan
PF00932LTDLamin Tail DomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039008DomainIntermediate filament, rod domainInterproscan
IPR036415Homologous_superfamilyLamin tail domain superfamilyInterproscan
IPR018039Conserved_siteIntermediate filament protein, conserved siteInterproscan
IPR001322DomainLamin tail domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45721LAMIN DM0-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005635Cellular Componentnuclear envelopeInterproscan
GO:0005652Cellular Componentnuclear laminaInterproscan
GO:0006998Biological Processnuclear envelope organizationInterproscan
GO:0007097Biological Processnuclear migrationInterproscan
GO:0031507Biological Processheterochromatin formationInterproscan
GO:0051664Biological Processnuclear pore localizationInterproscan
GO:0090435Biological Processprotein localization to nuclear envelopeInterproscan

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