Detailed information of HSymV2.0_g04.06111_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_4:1212162...1252339
NR annotation: XP_047137926.1, DNA-dependent protein kinase catalytic subunit [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8WN22DNA-dependent protein kinase catalytic subunit OS=Canis lupus familiaris OX=9615 GN=PRKDC PE=2 SV=1
Q8QGX4DNA-dependent protein kinase catalytic subunit OS=Gallus gallus OX=9031 GN=PRKDC PE=2 SV=1
P97313DNA-dependent protein kinase catalytic subunit OS=Mus musculus OX=10090 GN=Prkdc PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20500DNA-PKcs_NDNA-PKcs, N-terminalRepeatInterproscan
PF08163DNAPKcs_CC3DNA-dependent protein kinase catalytic subunit, CC3RepeatInterproscan
PF19704DNAPKcs_CC5DNA-PKcs, CC5RepeatInterproscan
PF20502DNAPKcs_CC1-2DNA-dependent protein kinase catalytic subunit, CC1/2RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050517FamilyDNA Damage Response and Repair KinaseInterproscan
IPR046804DomainDNA-PKcs, N-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR012582DomainDNA-dependent protein kinase catalytic subunit, CC3Interproscan
IPR045581DomainDNA-dependent protein kinase catalytic subunit, CC5Interproscan
IPR046803DomainDNA-dependent protein kinase catalytic subunit, CC1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11139ATAXIA TELANGIECTASIA MUTATED ATM -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan

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