Detailed information of HSymV2.0_g04.06482_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_4:8872865...8988253
NR annotation: CAB3976539.1, Collagen alpha-4(VI) chain [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B4F785Pikachurin OS=Rattus norvegicus OX=10116 GN=Egflam PE=2 SV=1
A3KN33Pikachurin OS=Bos taurus OX=9913 GN=EGFLAM PE=2 SV=1
Q63HQ2Pikachurin OS=Homo sapiens OX=9606 GN=EGFLAM PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF13768VWA_3von Willebrand factor type A domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF08685GONGON domainDomainInterproscan
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR002350DomainKazal domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR003645DomainFollistatin-like, N-terminalInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR012314DomainPeptidase M12B, GON-ADAMTSsInterproscan
IPR006558DomainLamG-like jellyroll foldInterproscan
IPR003884DomainFactor I / membrane attack complexInterproscan
IPR052229FamilyCollagen VI and Biomineralization Protein PIFInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22588UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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