Gene detail

Detailed information of HSymV2.0_g04.06562_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_4:9830205...9832498
NR annotation: XP_002155270.1, E3 ubiquitin-protein ligase NRDP1 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5FWL3	E3 ubiquitin-protein ligase NRDP1 OS=Xenopus laevis OX=8355 GN=rnf41 PE=2 SV=1
Q8BH75	E3 ubiquitin-protein ligase NRDP1 OS=Mus musculus OX=10090 GN=Rnf41 PE=1 SV=1
Q9H4P4	E3 ubiquitin-protein ligase NRDP1 OS=Homo sapiens OX=9606 GN=RNF41 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08941	USP8_interact	USP8 interacting	Domain	Interproscan
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR037255	Homologous_superfamily	NRDP1, C-terminal	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR015036	Domain	E3 ubiquitin-protein ligase NRDP1	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11981	RNF41, NRDP1; E3 ubiquitin-protein ligase NRDP1	EC:2.3.2.27	Mitochondrial biogenesis	ko03029	deepkoala