Detailed information of HSymV2.0_g04.06564_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_4:9842937...9905843
NR annotation: XP_047137926.1, DNA-dependent protein kinase catalytic subunit [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8QGX4DNA-dependent protein kinase catalytic subunit OS=Gallus gallus OX=9031 GN=PRKDC PE=2 SV=1
P78527DNA-dependent protein kinase catalytic subunit OS=Homo sapiens OX=9606 GN=PRKDC PE=1 SV=3
Q8WN22DNA-dependent protein kinase catalytic subunit OS=Canis lupus familiaris OX=9615 GN=PRKDC PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00454PI3_PI4_kinasePhosphatidylinositol 3- and 4-kinaseFamilyInterproscan
PF08163DNAPKcs_CC3DNA-dependent protein kinase catalytic subunit, CC3RepeatInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF20502DNAPKcs_CC1-2DNA-dependent protein kinase catalytic subunit, CC1/2RepeatInterproscan
PF20500DNA-PKcs_NDNA-PKcs, N-terminalRepeatInterproscan
PF02259FATFAT domainRepeatInterproscan
PF19704DNAPKcs_CC5DNA-PKcs, CC5RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000403DomainPhosphatidylinositol 3-/4-kinase, catalytic domainInterproscan
IPR018936Conserved_sitePhosphatidylinositol 3/4-kinase, conserved siteInterproscan
IPR012582DomainDNA-dependent protein kinase catalytic subunit, CC3Interproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR000488DomainDeath domainInterproscan
IPR046803DomainDNA-dependent protein kinase catalytic subunit, CC1/2Interproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR014009DomainPIK-related kinaseInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR050517FamilyDNA Damage Response and Repair KinaseInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR046804DomainDNA-PKcs, N-terminalInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR037706DomainDNA-dependent protein kinase catalytic subunit, catalytic domainInterproscan
IPR036940Homologous_superfamilyPhosphatidylinositol 3-/4-kinase, catalytic domain superfamilyInterproscan
IPR003151DomainPIK-related kinase, FATInterproscan
IPR045581DomainDNA-dependent protein kinase catalytic subunit, CC5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11139ATAXIA TELANGIECTASIA MUTATED ATM -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016301Molecular Functionkinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004677Molecular FunctionDNA-dependent protein kinase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

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