Gene detail

Detailed information of HSymV2.0_g04.06673_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_4:11330592...11337984
NR annotation: XP_002160793.3, uncharacterized protein LOC100214037 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HSymV2.0_g04.06673_t1

TTTTTCTACAGTATGGTTTTTTATATTTTTTTGTTTTTGAGACGCATACATCTTTTAAACGATGTAGATTTTGTCAGGGCATAATAGCAGTTTCTCTTCaactaaaatagataagcctgaaacccttgaatattcatcattctcaacacaaaaaccttcaactaGTTTTGATACATTTGGTTATTTTATTTTGGGTCTTTTTTCTGAGAACTTAAAATACTCTAAAAAAAATAAAGGGAAAACTTATTGTTATAAAAATAGGAAAACTTTGTCAAAGTTTTTGGTGGACATGGACTGGTGGATGGAGTGATGTGATGTGAGTATTGAGATCACTGCCTTTTAGCTTGATAGGCTGTCAATACATAAATGAGGATTTATTGTACTATGTTATTGTAATTATTAGCACCTTGCAGATTAATTTGTTGTTTTAGTGTAAAAATTATGTAAGATATGACAGAAAGTGCAAGTGAGAGCAGTTACATTACTGCTTCCAGTGTGAACCAAATTCGTAAACTGCGGAAGAAACTTCGACAAATCGACAAATTGAAACGTTTACAGAGAGAACTGTCGTCAGAAGAAATGGAAAAGATAAAGACCAAAGATTCTCTCCGCTGCGAATTACACGAGTTGCTTGAAGGACAAGAACAAGCCATGGTTGCACTAACTGAAAAGGTGCAAGACACATCGGTGGTAGATGAAGGAGCGACAAGGAAAGTCAACGCCTTAGTGGAGTTTGACCACAAAAATCTAAATGATGAGGTTAATGCTGCAAATAGTGAGAACTGTAGATACGATAATGAGAAAACTGAAATTAACGGTGTGCACGACCTAAAAACAGACGAAGAACGTGAAAAAGATAACGCTGATCAGGAGGATAAAATAAAAAGTTATCAGTCTACTCCTACTGAAACAACCGTAAAAGTAGATACGGCGCTAACTATTACGCGTAAGTCCTTAAGAGAGCGTAAACCCAAGAGTAGTGTCGAAAGTGCAAAAACGAAACCGGGAAATCCGTCTATTACAGAACAGTTGTTCCAAGACCTGAATCTTAAAGTTGGGTTGTTAGAAGGCCATCACGACGACGCGTGTGCGGTTGACTTGTGTGGAAATTTTGTTGTCAGTGGAAGTCGAGATACAAGTTTGAAATTATGGATAGCATCTTCGCGTGAAGAACTCAAAAGTCTAGGTGGACATGACGCAGCTATTACTGGTGTATGCTTTATGAGAGATAAACCGTTTTCCACTTATCCGAATGCCGTGACGGCGTCGTATGATTGTTCGTTAAGAGTTTGGGATCTCGAGAAAGGGGAAACTATGAAATCCATATACGTGTATTCACCTGTGCTTTGCCTCGATTATTCAGCTGGTGTTGTTGCAATCGGGACGGAGGGGGGTAAGGTTGAGTTGTATAATGTTGAGAGCAGTCAGCAGTTGTTTACAGTGAGAGCACACGAAGATGCTGTGTCAGCTGTAAAGATTTTATCTGATCGTAAGATTGCATCGGGTTCATCTGATGGCATCATTAAAATTCATGACCCAAAAGTTGGTGATGCTGCCATCTTTGTGTTGGATCTTGCTACCATCAAGATCAAACAAGAAAGTAAAGAAAACGTTGCGGCTACACCCCTACTAAATACATCAAAGATTAACTGTATTACGTCATGGAATGATTACGTCATCTATGGTGATGATGGTTTTAACGTGAAAGTATTGGACTATCAGAAGGGAGAGGTCATCAAATTGCGCAACAACTTAAACGAGTACTGTCCAACAGAAGCGTTGAGTATTGGCGAGGTTCAAGGTCGTCCTTTCTTATTCAGTGTTGGTTCTGATGTTGATAAAGGCGATGGGTATATTAATGTTCGTTCCTTACCAGACTTTCAGTATCTTGGAACTATACGAGATACAAAGGAGAATTCTGGTTCCATCACCACATTCCGTGTTGAGGAGGTAGATTCTAAGCTTTGTTTCGTTACTGGTGGTATGCAGCTTCGAGTATGGGATCAAGCACGGCGAGCGAAGAAGAGAAAAGGCTCTAGCGAGGACAATTCGCTAATCCCATGCAAGTTCATCTGTAGCTACACAGAATGCAAAGAGTCAGAACCTGAATCAGAGAGTGATAGCGAATCGCAAACGAGTAGCAAAGAAGCTTCGGTGATATCAGAACAAGCGAGACAAAGTTATTGCGTCATACTGTGA

Protein

Uniprot

Uniprot term	Description
O62471	Protein qui-1 OS=Caenorhabditis elegans OX=6239 GN=qui-1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22847	WD40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan