Gene detail

Detailed information of HSymV2.0_g04.06725_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_4:11943329...11948224
NR annotation: KAJ8353656.1, hypothetical protein SKAU_G00212230 [Synaphobranchus kaupii]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
A0A345BJN8	MFS-type transporter clz9 OS=Cochliobolus lunatus OX=5503 GN=clz9 PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	HTH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan
PF05225	HTH_psq	helix-turn-helix, Psq domain	Domain	Interproscan
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan
IPR007889	Domain	DNA binding HTH domain, Psq-type	Interproscan
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19303	TRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan