Detailed information of HSymV2.0_g04.07224_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_4:20039998...20052559
NR annotation: XP_047139215.1, uncharacterized protein LOC100211251 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5PSV9Mediator of DNA damage checkpoint protein 1 OS=Mus musculus OX=10090 GN=Mdc1 PE=1 SV=1
Q5U2M8Mediator of DNA damage checkpoint protein 1 OS=Rattus norvegicus OX=10116 GN=Mdc1 PE=1 SV=2
Q767L8Mediator of DNA damage checkpoint protein 1 OS=Sus scrofa OX=9823 GN=MDC1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00498FHAFHA domainFamilyInterproscan
PF16770RTT107_BRCT_5Regulator of Ty1 transposition protein 107 BRCT domainDomainInterproscan
PF16589BRCT_2BRCT domain, a BRCA1 C-terminus domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051579FamilyDNA Damage Response and Transcriptional RegulatorInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR001357DomainBRCT domainInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23196PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20780MDC1; mediator of DNA damage checkpoint protein 1-DNA repair and recombination proteinsko03400deepkoala

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