Detailed information of HSymV2.0_g04.07619_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_4:25446256...25447089
NR annotation: XP_012556338.1, U6 snRNA phosphodiesterase 1-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZYI9U6 snRNA phosphodiesterase 1 OS=Xenopus laevis OX=8355 GN=usb1 PE=2 SV=1
Q0II50U6 snRNA phosphodiesterase 1 OS=Bos taurus OX=9913 GN=USB1 PE=2 SV=1
Q5I0I5U6 snRNA phosphodiesterase 1 OS=Rattus norvegicus OX=10116 GN=Usb1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09749HVSLUncharacterised conserved proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027521FamilyU6 snRNA phosphodiesterase 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13522UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0034477Biological ProcessU6 snRNA 3'-end processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23093USB1; U6 snRNA phosphodiesteraseEC:3.1.4.-
Spliceosomeko03041deepkoala

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