Detailed information of HSymV2.0_g05.08272_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_5:7731430...7747840
NR annotation: XP_002160112.1, radixin [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P26043Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3
Q32LP2Radixin OS=Bos taurus OX=9913 GN=RDX PE=2 SV=1
P35241Radixin OS=Homo sapiens OX=9606 GN=RDX PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20492ERM_helicalEzrin/radixin/moesin, alpha-helical domainCoiled-coilInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00769ERM_CEzrin/radixin/moesin family C terminalDomainInterproscan
PF09379FERM_NFERM N-terminal domain DomainInterproscan
PF09380FERM_CFERM C-terminal PH-like domainDomainInterproscan
PF00373FERM_MFERM central domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011174FamilyEzrin/radixin/moesinInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR019747Conserved_siteFERM conserved siteInterproscan
IPR046810DomainEzrin/radixin/moesin, alpha-helical domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR019749DomainBand 4.1 domainInterproscan
IPR019748DomainFERM central domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR018980DomainFERM, C-terminal PH-like domainInterproscan
IPR041789DomainERM family, FERM domain C-lobeInterproscan
IPR008954Homologous_superfamilyMoesin tail domain superfamilyInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR000299DomainFERM domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR000798FamilyEzrin/radixin/moesin-likeInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR011259DomainEzrin/radixin/moesin, C-terminalInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR018979DomainFERM, N-terminalInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23281MERLIN/MOESIN/EZRIN/RADIXINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005902Cellular ComponentmicrovillusInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0008360Biological Processregulation of cell shapeInterproscan
GO:0030175Cellular ComponentfilopodiumInterproscan
GO:0045177Cellular Componentapical part of cellInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:1902115Biological Processregulation of organelle assemblyInterproscan
GO:1902966Biological Processpositive regulation of protein localization to early endosomeInterproscan
GO:2000643Biological Processpositive regulation of early endosome to late endosome transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0008092Molecular Functioncytoskeletal protein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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