Gene detail

Detailed information of HSymV2.0_g05.08623_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_5:12568735...12574513
NR annotation: NP_001267778.1, Runx [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q64131	Runt-related transcription factor 3 OS=Mus musculus OX=10090 GN=Runx3 PE=1 SV=3
Q6PF39	Runt-related transcription factor 1 OS=Xenopus laevis OX=8355 GN=runx1 PE=2 SV=2
Q13761	Runt-related transcription factor 3 OS=Homo sapiens OX=9606 GN=RUNX3 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	Runt

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00853	Runt	Runt domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013524	Domain	Runt domain	Interproscan
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR012346	Homologous_superfamily	p53/RUNT-type transcription factor, DNA-binding domain superfamily	Interproscan
IPR000040	Family	Acute myeloid leukemia 1 protein (AML1)/Runt	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11950	RUNT RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan