Detailed information of HSymV2.0_g05.08826_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_5:16435653...16447744
NR annotation: XP_047128998.1, cytosol aminopeptidase [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P28839Cytosol aminopeptidase OS=Sus scrofa OX=9823 GN=LAP3 PE=1 SV=2
Q5XGB9Cytosol aminopeptidase OS=Xenopus tropicalis OX=8364 GN=lap3 PE=2 SV=1
P00727Cytosol aminopeptidase OS=Bos taurus OX=9913 GN=LAP3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01142TruDtRNA pseudouridine synthase D (TruD)FamilyInterproscan
PF00883Peptidase_M17Cytosol aminopeptidase family, catalytic domainDomainInterproscan
PF02789Peptidase_M17_NCytosol aminopeptidase family, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020119Conserved_sitePseudouridine synthase TruD, conserved siteInterproscan
IPR001656FamilyPseudouridine synthase, TruDInterproscan
IPR042214Homologous_superfamilyPseudouridine synthase, TruD, catalytic domainInterproscan
IPR011356FamilyPeptidase M17, leucine aminopeptidase/peptidase BInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR000819DomainPeptidase M17, leucyl aminopeptidase, C-terminalInterproscan
IPR043472Homologous_superfamilyMacro domain-likeInterproscan
IPR008283DomainPeptidase M17, leucyl aminopeptidase, N-terminalInterproscan
IPR011760DomainPseudouridine synthase, TruD, insertion domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13326TRNA PSEUDOURIDINE SYNTHASE DInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0019538Biological Processprotein metabolic processInterproscan
GO:0030145Molecular Functionmanganese ion bindingInterproscan
GO:0070006Molecular Functionmetalloaminopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

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