Gene detail

Detailed information of HSymV2.0_g05.08898_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_5:17881925...17883094
NR annotation: NXS93649.1, HMX1 protein [Jacana jacana]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q504H8	Homeobox protein HMX3 OS=Danio rerio OX=7955 GN=hmx3 PE=2 SV=1
Q90XP0	Homeobox protein HMX3-A OS=Oryzias latipes OX=8090 GN=hmx3a PE=2 SV=1
Q8JJ64	Homeobox protein HMX3 OS=Xenopus laevis OX=8355 GN=hmx3 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR051300	Family	HMX Homeobox Transcription Factors	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46110	HOMEOBOX PROTEIN HMX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan