Detailed information of HSymV2.0_g05.09230_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_5:22047035...22047433
NR annotation: XP_012566941.2, homeobox protein mab-5-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P09080Homeobox protein HB1 (Fragment) OS=Tripneustes gratilla OX=7673 PE=2 SV=3
Q28600Homeobox protein Hox-A7 (Fragment) OS=Ovis aries OX=9940 GN=HOXA7 PE=2 SV=1
P10038Homeobox protein mab-5 OS=Caenorhabditis elegans OX=6239 GN=mab-5 PE=2 SV=3
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR050296FamilyAntennapedia-type homeoboxInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45659HOMEOBOX PROTEIN HOXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009952Biological Processanterior/posterior pattern specificationInterproscan

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