Detailed information of HSymV2.0_g05.09279_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_5:22733336...22750868
NR annotation: XP_012553446.2, bromodomain and WD repeat-containing protein 3 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2AHJ4Bromodomain and WD repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Brwd3 PE=1 SV=1
Q921C3Bromodomain and WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Brwd1 PE=1 SV=2
Q9NSI6Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=BRWD1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00439BromodomainBromodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR052060FamilyBromodomain and WD repeat-containingInterproscan
IPR001487DomainBromodomainInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR018359Conserved_siteBromodomain, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16266WD REPEAT DOMAIN 9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan
GO:0008360Biological Processregulation of cell shapeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11798BRWD1_3; bromodomain and WD repeat domain containing protein 1/3-Ubiquitin systemko04121deepkoala

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