Gene detail

Detailed information of HSymV2.0_g05.09420_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_5:24587235...24597355
NR annotation: XP_031553647.1, lateral signaling target protein 2 homolog isoform X2 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q0P4S0	Lateral signaling target protein 2 homolog OS=Xenopus tropicalis OX=8364 GN=zfyve28 PE=2 SV=1
A0JMD2	Lateral signaling target protein 2 homolog OS=Danio rerio OX=7955 GN=zfyve28 PE=2 SV=1
Q6ZPK7	Lateral signaling target protein 2 homolog OS=Mus musculus OX=10090 GN=Zfyve28 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF01363	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR050663	Family	Ankyrin Repeat and SOCS Box	Interproscan
IPR000306	Domain	FYVE zinc finger	Interproscan
IPR017455	Domain	Zinc finger, FYVE-related	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24193	ANKYRIN REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan