Detailed information of HSymV2.0_g05.09490_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_5:25459106...25468765
NR annotation: XP_047127291.1, DNA mismatch repair protein Msh2 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P43247DNA mismatch repair protein Msh2 OS=Mus musculus OX=10090 GN=Msh2 PE=1 SV=1
Q3MHE4DNA mismatch repair protein Msh2 OS=Bos taurus OX=9913 GN=MSH2 PE=2 SV=1
Q5XXB5DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05188MutS_IIMutS domain IIDomainInterproscan
PF05192MutS_IIIMutS domain IIIDomainInterproscan
PF05190MutS_IVMutS family domain IVDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036678Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR007860DomainDNA mismatch repair protein MutS, connector domainInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR007861DomainDNA mismatch repair protein MutS, clampInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006312Biological Processmitotic recombinationInterproscan
GO:0032301Cellular ComponentMutSalpha complexInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

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