Detailed information of HSymV2.0_g05.09492_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_5:25477813...25510997
NR annotation: XP_052809659.1, DNA mismatch repair protein Msh2-like [Mya arenaria]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3MHE4DNA mismatch repair protein Msh2 OS=Bos taurus OX=9913 GN=MSH2 PE=2 SV=1
Q5XXB5DNA mismatch repair protein Msh2 OS=Chlorocebus aethiops OX=9534 GN=MSH2 PE=2 SV=1
P43246DNA mismatch repair protein Msh2 OS=Homo sapiens OX=9606 GN=MSH2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00017SH2SH2 domainDomainInterproscan
PF00488MutS_VMutS domain VDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan
IPR000980DomainSH2 domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006312Biological Processmitotic recombinationInterproscan
GO:0032301Cellular ComponentMutSalpha complexInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

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