Detailed information of HSymV2.0_g05.09854_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_5:34174172...34190001
NR annotation: XP_009055647.1, hypothetical protein LOTGIDRAFT_153519 [Lottia gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P26258Tetranectin-like protein OS=Carcharhinus perezii OX=303935 PE=1 SV=1
P07897Aggrecan core protein OS=Rattus norvegicus OX=10116 GN=Acan PE=1 SV=2
Q61282Aggrecan core protein OS=Mus musculus OX=10090 GN=Acan PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR050111FamilyC-type lectin and snaclec domain-containing proteinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22803MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan

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