Gene detail

Detailed information of HSymV2.0_g06.09952_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_6:8329579...8338252
NR annotation: XP_051879091.1, endoribonuclease LACTB2 isoform X2 [Pristis pectinata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q0V9A9	Endoribonuclease LACTB2 OS=Xenopus tropicalis OX=8364 GN=lactb2 PE=2 SV=1
Q5XGR8	Endoribonuclease LACTB2 OS=Xenopus laevis OX=8355 GN=lactb2 PE=2 SV=1
Q1LZ83	Endoribonuclease LACTB2 OS=Bos taurus OX=9913 GN=LACTB2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17778	BLACT_WH	Beta-lactamase associated winged helix domain	Domain	Interproscan
PF00753	Lactamase_B	Metallo-beta-lactamase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041516	Domain	LACTB2, winged helix domain	Interproscan
IPR001279	Domain	Metallo-beta-lactamase	Interproscan
IPR036866	Homologous_superfamily	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Interproscan
IPR050662	Family	Secondary metabolite biosynthesis-associated thioesterase	Interproscan
IPR047921	Domain	LACTB2-like, MBL-fold metallo hydrolase domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23131	ENDORIBONUCLEASE LACTB2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003727	Molecular Function	single-stranded RNA binding	Interproscan
GO:0004521	Molecular Function	RNA endonuclease activity	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16639	LACTB2; endoribonuclease LACTB2	EC:3.1.27.-	Mitochondrial biogenesis	ko03029	deepkoala