Gene detail

Detailed information of HSymV2.0_g06.10157_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_6:10859581...10863964
NR annotation: XP_031571292.1, neurogenic locus notch homolog protein 1-like isoform X6 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O08710	Thyroglobulin OS=Mus musculus OX=10090 GN=Tg PE=1 SV=3
P06882	Thyroglobulin OS=Rattus norvegicus OX=10116 GN=Tg PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01392	Fz	Fz domain	Domain	Interproscan
PF00086	Thyroglobulin_1	Thyroglobulin type-1 repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043159	Homologous_superfamily	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	Interproscan
IPR020067	Domain	Frizzled domain	Interproscan
IPR000716	Domain	Thyroglobulin type-1	Interproscan
IPR036790	Homologous_superfamily	Frizzled cysteine-rich domain superfamily	Interproscan
IPR051950	Family	Developmental regulator and protease inhibitor	Interproscan
IPR036857	Homologous_superfamily	Thyroglobulin type-1 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12352	SECRETED MODULAR CALCIUM-BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005604	Cellular Component	basement membrane	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0007160	Biological Process	cell-matrix adhesion	Interproscan