Gene detail

Detailed information of HSymV2.0_g06.10393_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_6:13822971...13825583
NR annotation: CAH3045052.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HSymV2.0_g06.10393_t1

AATTATGTTATGTGCTAATAACTGAAATTCTCATAATGACTTAGCATAAAATATGATAGCTACTTATATAAAGCCCTGCCGCTTTGTGTAGTTCATTCAGTTCGCAATAACTTTTTAGGTAAACACATAAACAAAATGAAAAGCATGGTATGGTTGGCTTTGTTGTTGACACTCTCTGCGGTGGAGTTTCTACATGCACAGTTAACTTGGGAAAAACTTCCAGTAACTGGGGCTGCTCCTCCTGCGAGAAAAGATCATGCGATGGGTTACGACGGCATGCGAAACAGAATTCTAATATTCGGTGGTAGAGCGTCAAACGAAGTCGACGTTTTTAACGACACTTGGGCGTATGACGTCACCAATAAAAATTGGACGAAAATAGATACGACGACGGCAGCGCCTGAAAAACGTTTTAGCACAGTGTACGGTGTCAGCAATGGCTACTTTTATGTAAGCACTGGCCAAGAAGCAGAAAACCTTTACGATGATATCTGGCGTTTTGATCTGTCCACCAACACATGGAAAAAACTCAATCCATCTGGAAAGAAACCAGGTCAAATTTACGGAGCCGGGGGTGGTTTCTACACAAACACAAGCACAAAGTTTTATCTGACTCACGGGTTTTCGGCATCTGTTCGTTATGCCAATACTCTGGTTTACGATACGGAATTAAACCACTGGACTGAGATATTTCCAGATAAGAGCTCTTACTCGTATGGCCATCCTAACTCGAGGTGTCTTCATTCTGGCACTATGGTAGCCGAAGACTTACTTCTTATGTATGGAGGTTGCTTGAGCGGTGGGATGACAGGAGGAGCTTGTCCAGCTTTTGACTCATGGATGTTTTCAACCAGCAAACAATCGTGGACTCACCTACACGACTGTGCATCTCCTCGTACGTATTCTAGCCTTGCTCTGCTTCCAATGGTTGGCGAGCAAAGGCGAGTTGTTTTGTACGGAGGAGGCGAGAAAAATAATCAAGTTTTAGTCGTTGATAAAGCTGAGAAGGATCAAGTTGCCATCTTTAATGTAAACAAAGAAGAATGGGAATTAAAAAGAGCAAGTGGAACAGCTCCAGAAAAGCGAGTTGGTGCCTCGATGGTTCAACATCCAGAGGGCGTACTCATGTCTGGTGGAATAGCTGGTGACGAAACTGACATCTGGATATTAAGAGGTAATTCGACCTCAAGTGACCAAGCACCAAAGCATTCCCAAACTTGCAAGAAACCGTTCGCAGGCATTTTTAACCTAGTCATGTTGCATGGAATTTTTATGGTACTTGGATGGGGCTTGTTTTTGCAACTTGGTGCATTCATCGCTCGTTACTTCCGACACAAAAATCCACTTTGGTTCCACTTGCATCGCCTATGTCAAATCACCGGTCTCATTTTAGCCCTGGCGGGTTTAATTTGCGCCGGCGTATCTGTTCGCTTTGATCACTTTAAGTTCGCCCATGGAGGAATTGGATTATTTGTGATGCTTGTGGGTATCTTACAACCAATCAATGCAGCTATACGACCTCATGTAAAACCCAACGAAGAGAAGGAATTGAAACGCAAGGTATGGGAAGCCTTTCACATCAATTTAGGTAGAATTGCGTTAATCTTGGCCGTCGTGAATATATCTTTGGGCTTACTTCAAGGTCAAGCGCGCGAAGGACATCACATCGCGTGGCATGTTTATGTTGCCTTGTTTGTACTGGCGTATATTTTTATGGAAGCAAGGCTGATATATAAAAAAGTAAAGGTGAACGGTGAGGACTTTGAAATGCGACAGAAATAAAAGTTTATATTGTGAGTTTTGTAAAATATAGCTGTTTTTATCCGGGCGTCTATTTTCATGATGCCGAAGTGAGATTTGATACGAGCGTtttttgttgtgtttttgttgttgttAAAGTCTCCTTCTGGATCAACATAAGTTCCAATTGGGTTTCATTACAATACGTTTTAAGTTTGAATGAATTTTTTACTGTTAATtctcggaaccaacctcgttcccaggcactttgctttgttgctcagggaccacaagaccctggggacgaggttgTCTGGCAACATTAAATTGGTAATTAAGGGAATGATTGTTATAAAAGAAACCACTAACTAATCGCTTTCCAATGAATATTTCATCTTTTTAAAATTATGTTCTGTCCCAACCTCCCTAGGACTATTATCTAAATCGCTACCTGATATCGTAAAAAGCAAAATGATGTACTGGGAACGAGGTTGATACCGCGTCTACTGTTTTCCACATACAAACAAGGTTTTTAGTATGTTGTTTTGTATTTTTCTGTGATTTTTCGTTGTTTTAATATTGTATGTACGATTGTAAAAAAAAATTGAACATGTATAAATATATATTCTTCACA

Protein

Uniprot

Uniprot term	Description
Q9M363	Cytochrome b561 and DOMON domain-containing protein At3g61750 OS=Arabidopsis thaliana OX=3702 GN=At3g61750 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03188	Cytochrom_B561	Eukaryotic cytochrome b561	Family	Interproscan
PF13418	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006593	Domain	Cytochrome b561/ferric reductase transmembrane	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR037293	Homologous_superfamily	Galactose oxidase, central domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23244	KELCH REPEAT DOMAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan