Detailed information of HSymV2.0_g06.10963_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_6:22379056...22392169
NR annotation: XP_012564998.2, uncharacterized protein LOC100213294 isoform X3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3URK3Methylcytosine dioxygenase TET1 OS=Mus musculus OX=10090 GN=Tet1 PE=1 SV=3
Q8NFU7Methylcytosine dioxygenase TET1 OS=Homo sapiens OX=9606 GN=TET1 PE=1 SV=2
Q6N021Methylcytosine dioxygenase TET2 OS=Homo sapiens OX=9606 GN=TET2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12851Tet_JBPOxygenase domain of the 2OGFeDO superfamily DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040175FamilyMethylcytosine dioxygenase TET1/2/3Interproscan
IPR046942DomainMethylcytosine dioxygenase TET1-3, oxygenase domainInterproscan
IPR024779Domain2OGFeDO JBP1/TET, oxygenase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23358UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006211Biological Processobsolete 5-methylcytosine catabolic processInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0070579Molecular Function5-methylcytosine dioxygenase activityInterproscan
GO:0080111Biological Processobsolete DNA demethylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24309TET2_3; methylcytosine dioxygenase TET2/3EC:1.14.11.80
Chromosome and associated proteinsko03036deepkoala

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