Gene detail

Detailed information of HSymV2.0_g06.11025_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_6:23061260...23062336
NR annotation: XP_047145055.1, tRNA (cytosine(38)-C(5))-methyltransferase isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7YS61	tRNA (cytosine(38)-C(5))-methyltransferase OS=Bos taurus OX=9913 GN=TRDMT1 PE=2 SV=1
O55055	tRNA (cytosine(38)-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Trdmt1 PE=1 SV=2
A0A2H1VE33	tRNA (cytosine(38)-C(5))-methyltransferase OS=Spodoptera frugiperda OX=7108 GN=TRDMT1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00145	DNA_methylase	C-5 cytosine-specific DNA methylase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001525	Family	C-5 cytosine methyltransferase	Interproscan
IPR050750	Family	Cytosine-specific C5-methyltransferase	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46098	TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15336	TRDMT1, DNMT2; tRNA (cytosine38-C5)-methyltransferase	EC:2.1.1.204	Transfer RNA biogenesis	ko03016	deepkoala