Gene detail

Detailed information of HSymV2.0_g06.11205_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_6:25236151...25236556
NR annotation: AMK01817.1, PABP [Mytilus galloprovincialis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6DEY7	Embryonic polyadenylate-binding protein OS=Xenopus tropicalis OX=8364 GN=epabp PE=2 SV=1
P61286	Polyadenylate-binding protein 1 OS=Bos taurus OX=9913 GN=PABPC1 PE=2 SV=1
P11940	Polyadenylate-binding protein 1 OS=Homo sapiens OX=9606 GN=PABPC1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR052084	Family	Spliceosome-associated SF3B4 subunit	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48030	SPLICING FACTOR 3B SUBUNIT 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005689	Cellular Component	U12-type spliceosomal complex	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0048026	Biological Process	positive regulation of mRNA splicing, via spliceosome	Interproscan