Detailed information of HSymV2.0_g06.11207_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_6:25249460...25305255
NR annotation: XP_047145399.1, uncharacterized protein LOC100214834 isoform X5 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7S4N4Probable serine incorporator OS=Nematostella vectensis OX=45351 GN=serinc PE=3 SV=1
Q9NRX5Serine incorporator 1 OS=Homo sapiens OX=9606 GN=SERINC1 PE=1 SV=1
Q5R419Serine incorporator 1 OS=Pongo abelii OX=9601 GN=SERINC1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF03348SerincSerine incorporator (Serinc)FamilyInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR011106DomainSeven cysteines, N-terminalInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR005016FamilySerine incorporator/TMS membrane proteinInterproscan
IPR006558DomainLamG-like jellyroll foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR029865FamilyDyslexia-associated protein KIAA0319-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46182FI19480P1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0001764Biological Processneuron migrationInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan

TOP