Detailed information of HSymV2.0_g07.12079_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_7:12420375...12439109
NR annotation: XP_047143466.1, serine hydroxymethyltransferase, cytosolic [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96S06Lipase maturation factor 1 OS=Homo sapiens OX=9606 GN=LMF1 PE=1 SV=1
Q3U3R4Lipase maturation factor 1 OS=Mus musculus OX=10090 GN=Lmf1 PE=1 SV=1
Q0P5C0Lipase maturation factor 1 OS=Bos taurus OX=9913 GN=LMF1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00464SHMTSerine hydroxymethyltransferaseDomainInterproscan
PF06762LMF1Lipase maturation factorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001085FamilySerine hydroxymethyltransferaseInterproscan
IPR049943FamilySerine hydroxymethyltransferase-likeInterproscan
IPR039429DomainSerine hydroxymethyltransferase-like domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR009613FamilyLipase maturation factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11680SERINE HYDROXYMETHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004372Molecular Functionglycine hydroxymethyltransferase activityInterproscan
GO:0019264Biological Processglycine biosynthetic process from serineInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0035999Biological Processtetrahydrofolate interconversionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006565Biological ProcessL-serine catabolic processInterproscan
GO:0006730Biological Processone-carbon metabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046653Biological Processtetrahydrofolate metabolic processInterproscan
GO:0046655Biological Processfolic acid metabolic processInterproscan
GO:0050897Molecular Functioncobalt ion bindingInterproscan
GO:0070905Molecular Functionserine bindingInterproscan
GO:0051604Biological Processprotein maturationInterproscan

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