Gene detail

Detailed information of HSymV2.0_g07.12192_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_7:15802860...15815153
NR annotation: XP_004206634.2, 28S ribosomal protein S7, mitochondrial [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q498Z6	Small ribosomal subunit protein uS7m OS=Danio rerio OX=7955 GN=mrps7 PE=2 SV=1
Q6DDY9	Small ribosomal subunit protein uS7m OS=Xenopus laevis OX=8355 GN=mrps7 PE=2 SV=1
Q5ZMU0	Small ribosomal subunit protein uS7m OS=Gallus gallus OX=9031 GN=MRPS7 PE=2 SV=2

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00177	Ribosomal_S7	Ribosomal protein S7p/S5e	Domain	Interproscan
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR036823	Homologous_superfamily	Small ribosomal subunit protein uS7 domain superfamily	Interproscan
IPR023798	Domain	Small ribosomal subunit protein uS7 domain	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan
IPR000235	Family	Small ribosomal subunit protein uS7	Interproscan
IPR020606	Conserved_site	Small ribosomal subunit protein uS7, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11205	RIBOSOMAL PROTEIN S7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000028	Biological Process	ribosomal small subunit assembly	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005763	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0019843	Molecular Function	rRNA binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan