Detailed information of HSymV2.0_g07.12225_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_7:16266606...16280112
NR annotation: XP_047143384.1, RNA exonuclease 1-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8L7M4Small RNA degrading nuclease 5 OS=Arabidopsis thaliana OX=3702 GN=SDN5 PE=2 SV=2
P53331RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RNH70 PE=1 SV=1
O94443Uncharacterized exonuclease C637.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC637.09 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00929RNase_TExonucleaseFamilyInterproscan
PF09429Wbp11WW domain binding protein 11FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034922DomainRNA exonuclease 1-like, exonuclease domainInterproscan
IPR047021FamilyRNA exonuclease REXO1/REXO3/REXO4-likeInterproscan
IPR013520DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR019007FamilyWW domain binding protein 11Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12801RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004527Molecular Functionexonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14570REX1, REXO1, REXO5, RNH70; RNA exonucleaseEC:3.1.-.-
Ribosome biogenesisko03009deepkoala

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