Detailed information of HSymV2.0_g08.12972_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_8:3968309...3986247
NR annotation: XP_004210599.1, nuclear receptor subfamily 2 group F member 1-A [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5RDI0S1 RNA-binding domain-containing protein 1 OS=Pongo abelii OX=9601 GN=SRBD1 PE=2 SV=1
Q8N5C6S1 RNA-binding domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SRBD1 PE=1 SV=2
Q497V5S1 RNA-binding domain-containing protein 1 OS=Mus musculus OX=10090 GN=Srbd1 PE=2 SV=3
Gene familySubfamily
Transcription Factors FamilyESR-like
Transcription Factors FamilyMiscellaneous
Transcription Factors FamilyRXR-like
Transcription Factors FamilyGCNF-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17674HHH_9HHH domainDomainInterproscan
PF16921Tex_YqgFTex protein YqgF-like domainDomainInterproscan
PF12836HHH_3Helix-hairpin-helix motifDomainInterproscan
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR041692DomainHHH domain 9Interproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR001723FamilyNuclear hormone receptorInterproscan
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR010994Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR032639DomainTex protein, YqgF-like domainInterproscan
IPR023323Homologous_superfamilyTex-like domain superfamilyInterproscan
IPR050437FamilyBacterial ribosomal protein bS1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1072430S RIBOSOMAL PROTEIN S1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan

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