Detailed information of HSymV2.0_g08.13072_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_8:5194832...5197759
NR annotation: NP_001274297.1, high mobility group-T protein-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P40644High mobility group protein 1 homolog OS=Strongylocentrotus purpuratus OX=7668 GN=HMG1 PE=2 SV=1
Q6CC79Non-histone chromosomal protein 6 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=NHP6 PE=3 SV=1
P33417Intrastrand cross-link recognition protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IXR1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09011HMG_box_2HMG-box domainDomainInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR050342FamilyHigh Mobility Group Box (HMGB)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48112HIGH MOBILITY GROUP PROTEIN DSP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008301Molecular FunctionDNA binding, bendingInterproscan

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