Gene detail

Detailed information of HSymV2.0_g08.13280_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_8:7477205...7486256
NR annotation: XP_004207550.1, short stature homeobox protein 2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O42567	Retinal homeobox protein Rx-B OS=Xenopus laevis OX=8355 GN=rax-b PE=2 SV=2
O42201	Retinal homeobox protein Rx-A OS=Xenopus laevis OX=8355 GN=rax-a PE=2 SV=2
Q90963	Paired mesoderm homeobox protein 2 (Fragment) OS=Gallus gallus OX=9031 GN=PRRX2 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR051306	Family	Homeobox domain-containing regulator	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46123	MIX-TYPE HOMEOBOX GENE 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan