Detailed information of HSymV2.0_g08.13422_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_8:9076309...9094672
NR annotation: CAH3108647.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9ERC5Otoferlin OS=Rattus norvegicus OX=10116 GN=Otof PE=1 SV=2
Q5SPC5Otoferlin OS=Danio rerio OX=7955 GN=otof PE=3 SV=1
Q9ESF1Otoferlin OS=Mus musculus OX=10090 GN=Otof PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08150FerBFerB (NUC096) domainDomainInterproscan
PF00168C2C2 domainDomainInterproscan
PF16165Ferlin_CFerlin C-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000008DomainC2 domainInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR012561DomainFerlin B-domainInterproscan
IPR037725DomainFerlin, sixth C2 domainInterproscan
IPR032362DomainFerlin, C-terminal domainInterproscan
IPR037721FamilyFerlin familyInterproscan
IPR037723DomainFerlin, fourth C2 domainInterproscan
IPR037724DomainFerlin, fifth C2 domainInterproscan
IPR012968DomainFerIin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12546FER-1-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007009Biological Processplasma membrane organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19949OTOF; otoferlin-Membrane traffickingko04131deepkoala

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