Detailed information of HSymV2.0_g08.13733_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_8:12644806...12667622
NR annotation: XP_047144322.1, uncharacterized protein LOC100203426 isoform X5 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O60449Lymphocyte antigen 75 OS=Homo sapiens OX=9606 GN=LY75 PE=1 SV=3
P06027Echinoidin OS=Heliocidaris crassispina OX=1043166 PE=1 SV=1
C8YR32Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Loxhd1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF01822WSCWSC domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan
PF07691PA14PA14 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003582DomainShKT domainInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR011658DomainPA14 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47635CUB DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP