Detailed information of HSymV2.0_g08.14254_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_8:22292424...22297018
NR annotation: XP_047126676.1, high mobility group B protein 3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P26586High mobility group protein homolog TDP-1 OS=Trypanosoma brucei rhodesiense OX=31286 PE=2 SV=1
Q42344High mobility group B protein 4 OS=Arabidopsis thaliana OX=3702 GN=HMGB4 PE=1 SV=1
Q6BRB4Non-histone chromosomal protein 6 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=NHP6 PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR050342FamilyHigh Mobility Group Box (HMGB)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48112HIGH MOBILITY GROUP PROTEIN DSP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008301Molecular FunctionDNA binding, bendingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10802HMGB1; high mobility group protein B1-Exosomeko04147deepkoala

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