Gene detail

Detailed information of HSymV2.0_g09.15021_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_9:3814619...3818010
NR annotation: NP_001296695.1, zinc metalloproteinase nas-15-like precursor [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q20191	Zinc metalloproteinase nas-13 OS=Caenorhabditis elegans OX=6239 GN=nas-13 PE=2 SV=5
Q18439	Zinc metalloproteinase nas-8 OS=Caenorhabditis elegans OX=6239 GN=nas-8 PE=2 SV=3
O62243	Zinc metalloproteinase nas-1 OS=Caenorhabditis elegans OX=6239 GN=nas-1 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01400	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan
PF01549	ShK	ShK domain-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001506	Domain	Peptidase M12A	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan
IPR003582	Domain	ShKT domain	Interproscan
IPR034035	Domain	Astacin-like metallopeptidase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10127	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan