Gene detail

Detailed information of HSymV2.0_g09.15174_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_9:5765882...5772066
NR annotation: XP_047139170.1, major facilitator superfamily domain-containing protein 8 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HSymV2.0_g09.15174_t1

AACAGGATTGCAATGCGACTCTAGGTTATAATCCTATCAATGGAAACTTGAGACGAATTATTTTCTTTATTAAGAAAACTTATAAGTTGAAGGACTCTAGCCATTGGTCGTCAGTTCAAGTTATGTAGAGGAGTCGAGATGAACGGGAAACAGTTTGTGAGCGTATCAAATGAAACGCCATCTCAAAGAAAGCGAAGATGGCTGTCGATCAAGATCTTATGTCTGACTATGTTTTTCGACAGCTTATCCTTCTCTATCGTGCTCTCCTCCATATGGCCTTATTTACAAAAAGTAGGAGGTGATCCTAATTTGACGCCAATTTATGCTGGATGGGCGAATGTCGGGTTTCAACTGGCAGGAATATTTATAGACTTTATTATTGGTCACTGGACTAATAAGCGAGGCTCTACGGAACCAATTCTAATATCTTTAATATTTTTTGGTGTCGGGAATTTTCTTTATGGTTATGCAGAAGCTTTTGGCAGTTTTGGCGTTCCAATGATTATACTCTCGCGTACTTTGATTGGCTTATCAACAGGTGTCGATGTGGTATCACGTGTTGTACTAGCAGAATCAACTACGTTAAAAGAACGCACAAGCGCCATGGCATACATGTCCATTGCACACGGACTTGGTTTTTCATTTGGACCAGCTGTTCAACTGGCAACAATACCATTAGGTGATAAAGGTGTCTACATATCAACTCTTAGATTGTACCTTAACCTTTATACTGCGCCTGCATTTGCCAGTATATTGATCGCAATAGCAAATATAGCCATTGTGATTGGATGGTATCAAGAATTTCATGTGGATATATACAAGGATCATGAAGGAGATGAGAGTATCAATAAATACAAAAAACTTCTACGAGCCCATGGATTACAAAACACAAAAGCTGACCCAATTGCAATCATCGCAACCCTCGTCCTTTATTTTGTTGGACAGAGTGCGTTTGGTCTTTATGAAACAATATTAACACCATTAGCTATGGATGAATTAGCATGGAATGGAGAAGAAACTGCTTTGTATGTTGGTCTTCTTTTCCTTGCTGCTGGAATAATAGCTGTTTTTACATTTGGAATTTCTGACCTTCTTGAAAAAAGATTCAACGAGCGTCTCATATTACTTGCTGGATTTCTGTTAGTTTTGCTTGGTTTCATATCTCACCTTCCATGGGGTACAACATTTCCAAAGATTAAACCAACAGTACCATCTAATGCAACTTCTGAGATTCTGCAATCTGCAAAGGAACTTGTTGGCTGTCCTGAAGAGTATAATTGGTGTACAACTACTCCACAAATCAAGCTTCCGCAGTTTATTATTGGAATGATATTTCTTTCAATTGGATATCCATTTATACTTGTGATGACAACCACAATATATTCAAAGATTTTAGGACCAAAACCACAGGGTATAATGCAAAGCTGGTTTGCGGCTACCGGTGGAGCAGCTAGAACAATAGGTCCTGCTCTCGTCACTTATGCATACGTGGAAATAGGACCAAGATGGACATTCTTTAGCGTTGATGGATTACTGATGATATCCACTGTGTTATTAATTCTTGCATACAAAAAACTTATACCATATCATTTGTTTGTTCTCAGGAAGAACAAAGCAGCATTAGTTACTATAGACGATGATAAATTAGCATTAACCGGAAGTTTGAGTTCGGACGATTCTGCCTACTCAAATAATTATGTGCTTATGTCAGCGGTTTAGTATACGATCATATAGTAAGGTGGAAACACAGGAGCTTTGGTCCTATTATCAGTTGTCGACAAGTAAGTCAGACCTTCAAACATTGGAATAACAAAATGTCAAAAACGGTAAACTTTTCAGAAATACGAACAAGAAACTGGAGGAAAAGGGAAGCGCCTTTAAGTTTAAGGATTTGAAGATTTTATGGAAAATATTAATTATGTACAAGGGTGTTTTGAAAGCTCTTTGAACACAAAATGCAGGAAGTGTTCACAAAGGAAAACTAAACTTCTCCACTAGTAGAAGTATATTGCAAAACGATTATTATAAACATAAT

Protein

Uniprot

Uniprot term	Description
Q6GPQ3	Major facilitator superfamily domain-containing protein 8 OS=Xenopus laevis OX=8355 GN=mfsd8 PE=2 SV=1
Q8BH31	Major facilitator superfamily domain-containing protein 8 OS=Mus musculus OX=10090 GN=Mfsd8 PE=2 SV=1
Q8NHS3	Major facilitator superfamily domain-containing protein 8 OS=Homo sapiens OX=9606 GN=MFSD8 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051068	Family	Major Facilitator Superfamily Domain-Containing Protein	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23510	INNER MEMBRANE TRANSPORT PROTEIN YAJR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005765	Cellular Component	lysosomal membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12307	MSFD8, CLN7; MFS transporter, ceroid-lipofuscinosis neuronal protein 7	-	Transporters	ko02000	deepkoala