Detailed information of HSymV2.0_g09.17313_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_9:26010851...26023767
NR annotation: XP_047133599.1, AT-rich interactive domain-containing protein 4B [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P29374AT-rich interactive domain-containing protein 4A OS=Homo sapiens OX=9606 GN=ARID4A PE=1 SV=3
Q4LE39AT-rich interactive domain-containing protein 4B OS=Homo sapiens OX=9606 GN=ARID4B PE=1 SV=2
A2CG63AT-rich interactive domain-containing protein 4B OS=Mus musculus OX=10090 GN=Arid4b PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyARID

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan
PF08169RBB1NTRBB1NT (NUC162) domainDomainInterproscan
PF11717Tudor-knotRNA binding activity-knot of a chromodomain FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001606DomainARID DNA-binding domainInterproscan
IPR051232FamilyAT-rich Interactive Domain/SWI1 Chromatin RemodelingInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR002999DomainTudor domainInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR012603DomainARID4A/B, PWWP domainInterproscan
IPR025995DomainRNA binding activity-knot of a chromodomainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13964RBP-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

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