Detailed information of HSymV2.0_g10.17594_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_10:193559...195573
NR annotation: XP_005171794.1, pre-B-cell leukemia transcription factor 3 isoform X2 [Danio rerio]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7PMT1Homeobox protein extradenticle OS=Anopheles gambiae OX=7165 GN=exd PE=3 SV=2
P40424Pre-B-cell leukemia transcription factor 1 OS=Homo sapiens OX=9606 GN=PBX1 PE=1 SV=1
P41778Pre-B-cell leukemia transcription factor 1 OS=Mus musculus OX=10090 GN=Pbx1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05920Homeobox_KNHomeobox KN domainFamilyInterproscan
PF03792PBCPBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR008422DomainHomeobox KN domainInterproscan
IPR005542DomainPBX, PBC domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050224FamilyThree Amino acid Loop Extension (TALE) homeoboxInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0048568Biological Processembryonic organ developmentInterproscan
GO:0048666Biological Processneuron developmentInterproscan

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