Detailed information of HSymV2.0_g10.17889_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_10:8149841...8164665
NR annotation: XP_002167284.1, calumenin-B [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35887Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1
Q5RDD8Calumenin OS=Pongo abelii OX=9601 GN=CALU PE=2 SV=1
O43852Calumenin OS=Homo sapiens OX=9606 GN=CALU PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF13202EF-hand_5EF handDomainInterproscan
PF05625PAXNEBPAXNEB proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR008728FamilyElongator complex protein 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12896PAX6 NEIGHBOR PROTEIN PAXNEBInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0033588Cellular Componentelongator holoenzyme complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008023Cellular Componenttranscription elongation factor complexInterproscan

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